STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ORA75625.1DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (135 aa)    
Predicted Functional Partners:
ORA75793.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.821
ORA75623.1
DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.747
ORA75624.1
Potassium transporter TrkA; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.730
ORA75792.1
Potassium transporter TrkA; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.713
ORA75626.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.616
ORA75667.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.592
ORA75203.1
ATP-dependent DNA helicase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.588
htpX
Zinc metalloprotease HtpX; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase M48B family.
   
  
 0.585
ORA73250.1
TIGR03085 family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   
 0.582
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.
 
   
 0.471
Your Current Organism:
Mycobacterium heidelbergense
NCBI taxonomy Id: 53376
Other names: ATCC 51253, CIP 105424, DSM 44471, JCM 14842, M. heidelbergense, strain 2554/91
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.