STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ORA75136.1LytR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (489 aa)    
Predicted Functional Partners:
ORA75211.1
TIGR03089 family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.918
ORA75135.1
dTDP-4-dehydrorhamnose reductase; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose.
     
 0.892
BST25_06500
Hypothetical protein; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.838
ORA75210.1
dTDP-Rha--alpha-D-GlcNAc-pyrophosphate polyprenol alpha-3-L-rhamnosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.818
ORA70079.1
Primosomal protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.679
ORA70316.1
Thiamine pyrophosphokinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.659
ORA71906.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.630
ORA75082.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.618
ORA70558.1
Arabinosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.581
ORA70561.1
Arabinosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.571
Your Current Organism:
Mycobacterium heidelbergense
NCBI taxonomy Id: 53376
Other names: ATCC 51253, CIP 105424, DSM 44471, JCM 14842, M. heidelbergense, strain 2554/91
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.