STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ORA73668.1Toxin RelK; Derived by automated computational analysis using gene prediction method: Protein Homology. (85 aa)    
Predicted Functional Partners:
ORA73669.1
Prevent-host-death family protein; Antitoxin component of a type II toxin-antitoxin (TA) system.
 
 
 0.978
ORA74000.1
Prevent-host-death family protein; Antitoxin component of a type II toxin-antitoxin (TA) system.
 
 
 0.901
ORA75759.1
Prevent-host-death family protein; Antitoxin component of a type II toxin-antitoxin (TA) system.
  
 
 0.644
BST25_06960
VapC toxin family PIN domain ribonuclease; Antitoxin component of a type II toxin-antitoxin (TA) system.
  
 
 0.644
ORA76098.1
Prevent-host-death protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.638
ORA74866.1
Prevent-host-death protein; Antitoxin component of a type II toxin-antitoxin (TA) system.
  
 
 0.638
ORA72661.1
Addiction module antitoxin; Antitoxin component of a type II toxin-antitoxin (TA) system.
  
 
 0.638
ORA73670.1
Aldose epimerase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.634
ORA73671.1
2-polyprenylphenol hydroxylase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the globin family.
       0.466
Your Current Organism:
Mycobacterium heidelbergense
NCBI taxonomy Id: 53376
Other names: ATCC 51253, CIP 105424, DSM 44471, JCM 14842, M. heidelbergense, strain 2554/91
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