Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
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Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
ORA72517.1DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (114 aa)    
Predicted Functional Partners:
ORA72503.1
acetyl-CoA acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  0.963
ORA74444.1
beta-hydroxyacyl-ACP dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.946
ORA76528.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.933
ORA74952.1
Acyl dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.913
ORA74886.1
Short-chain dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
  0.900
ORA74951.1
Lipid-transfer protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  0.892
ORA74443.1
Lipid-transfer protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  0.886
ORA75379.1
acetyl-CoA acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  0.854
ORA75388.1
Transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  0.849
ORA75387.1
Acyl dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  0.821
Your Current Organism:
Mycobacterium heidelbergense
NCBI taxonomy Id: 53376
Other names: ATCC 51253, CIP 105424, DSM 44471, JCM 14842, M. heidelbergense, strain 2554/91
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