STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ORA72121.11,4-beta-xylanase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 5 (cellulase A) family. (385 aa)    
Predicted Functional Partners:
ORA75922.1
DUF4126 domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.594
ORA74509.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.507
ORA69546.1
UDP-glucose 6-dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
  0.487
ORA75331.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.484
ORA76049.1
1,3-beta-glucanase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   
 0.442
ORA76018.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.430
ORA75492.1
1,4-beta-glucanase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase family 6.
    
 0.430
ORA72119.1
MarR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.413
ORA72120.1
Methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.413
Your Current Organism:
Mycobacterium heidelbergense
NCBI taxonomy Id: 53376
Other names: ATCC 51253, CIP 105424, DSM 44471, JCM 14842, M. heidelbergense, strain 2554/91
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.