STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
vapC-9VapC toxin family PIN domain ribonuclease; Toxic component of a toxin-antitoxin (TA) system. An RNase. Belongs to the PINc/VapC protein family. (136 aa)    
Predicted Functional Partners:
ORA71919.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.998
ORA71132.1
Prevent-host-death family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.633
vapC-2
VapC toxin family PIN domain ribonuclease; Toxic component of a toxin-antitoxin (TA) system. An RNase. Belongs to the PINc/VapC protein family.
  
     0.611
ORA76100.1
Prevent-host-death protein; Antitoxin component of a type II toxin-antitoxin (TA) system.
 
 
 
 0.561
ORA71921.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.520
ORA71920.1
Hypothetical protein; Antitoxin component of a type II toxin-antitoxin (TA) system.
       0.512
ORA71922.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.512
ORA73503.1
Prevent-host-death protein; Antitoxin component of a type II toxin-antitoxin (TA) system.
 
 
   0.472
ORA69697.1
Antitoxin VapB; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.468
ORA74285.1
Antitoxin; Antitoxin component of a type II toxin-antitoxin (TA) system.
   
 
 0.467
Your Current Organism:
Mycobacterium heidelbergense
NCBI taxonomy Id: 53376
Other names: ATCC 51253, CIP 105424, DSM 44471, JCM 14842, M. heidelbergense, strain 2554/91
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.