STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ORA71417.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (105 aa)    
Predicted Functional Partners:
ORA71418.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.886
ORA71416.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.768
ORA71437.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.629
ORA71436.1
Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.619
ORA71415.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.619
ORA71419.1
Vegetative cell wall protein precursor; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.567
whiB-7
Transcriptional regulator; Acts as a transcriptional regulator. Probably redox- responsive. The apo- but not holo-form probably binds DNA.
       0.561
Your Current Organism:
Mycobacterium heidelbergense
NCBI taxonomy Id: 53376
Other names: ATCC 51253, CIP 105424, DSM 44471, JCM 14842, M. heidelbergense, strain 2554/91
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.