STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ORA71005.1Cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology. (151 aa)    
Predicted Functional Partners:
ORA71004.1
Short-chain dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
    0.864
ORA71003.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.847
ORA73671.1
2-polyprenylphenol hydroxylase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the globin family.
  
  
 0.764
ORA71006.1
Resuscitation-promoting factor RpfC; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.673
ORA71002.1
Cytochrome; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the cytochrome P450 family.
       0.637
ORA71001.1
Limonene-1,2-epoxide hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.531
ORA70536.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.489
ORA69973.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.469
ORA70559.1
DinB family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.460
ORA71438.1
TIGR03084 family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.422
Your Current Organism:
Mycobacterium heidelbergense
NCBI taxonomy Id: 53376
Other names: ATCC 51253, CIP 105424, DSM 44471, JCM 14842, M. heidelbergense, strain 2554/91
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.