STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cynS-2Cyanase; Catalyzes the reaction of cyanate with bicarbonate to produce ammonia and carbon dioxide; Belongs to the cyanase family. (151 aa)    
Predicted Functional Partners:
OJZ75634.1
Carbonic anhydrase; Reversible hydration of carbon dioxide. Belongs to the beta-class carbonic anhydrase family.
  
 
 0.782
OJZ69291.1
Carbonate dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.762
OJZ76236.1
Transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.725
OJZ72018.1
Transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.725
OJZ68758.1
Sodium-independent anion transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.669
OJZ63319.1
Sodium-independent anion transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.669
OJZ69809.1
Nitroreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.660
OJZ68766.1
Copper-translocating P-type ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
  0.612
apt
Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis.
     
 0.517
OJZ74615.1
Peroxiredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.504
Your Current Organism:
Mycobacterium paraffinicum
NCBI taxonomy Id: 53378
Other names: ATCC 12670, DSM 44181, JCM 17782, M. paraffinicum, NCIMB 10420
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