STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEB95512.1Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family. (300 aa)    
Predicted Functional Partners:
SED81607.1
General secretion pathway protein C.
  
     0.709
SED83193.1
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.706
SEC81542.1
Uncharacterized conserved protein YegJ, DUF2314 family.
  
     0.698
SED83148.1
DNA-binding transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.680
SEC40201.1
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.675
SEE32908.1
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.669
SED95617.1
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.662
SEC31394.1
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.659
SEC58324.1
DNA-binding transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.649
SED18887.1
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.647
Your Current Organism:
Pseudomonas anguilliseptica
NCBI taxonomy Id: 53406
Other names: ATCC 33660, CCUG 35503, CIP 106711, DSM 12111, LMG 21629, LMG:21629, P. anguilliseptica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.