Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
SEB96731.1Amino acid ABC transporter substrate-binding protein, PAAT family. (260 aa)    
Predicted Functional Partners:
SEC60614.1
Amino acid ABC transporter substrate-binding protein, PAAT family.
 
 
 0.882
SED62481.1
Polar amino acid transport system substrate-binding protein.
  
     0.766
SEC25231.1
Amino acid ABC transporter substrate-binding protein, PAAT family.
  
     0.765
SED63719.1
Polar amino acid transport system substrate-binding protein.
  
     0.764
SEB90620.1
Polar amino acid transport system substrate-binding protein.
  
     0.760
SEC04526.1
Polar amino acid transport system substrate-binding protein.
  
     0.760
SED23897.1
Amino acid ABC transporter substrate-binding protein, PAAT family.
  
     0.758
SED64211.1
Amino acid ABC transporter substrate-binding protein, PAAT family.
  
     0.754
SEC93290.1
Amino acid ABC transporter substrate-binding protein, PAAT family.
  
     0.745
SEE42157.1
Polar amino acid transport system substrate-binding protein.
  
     0.745
Your Current Organism:
Pseudomonas anguilliseptica
NCBI taxonomy Id: 53406
Other names: ATCC 33660, CCUG 35503, CIP 106711, DSM 12111, LMG 21629, LMG:21629, P. anguilliseptica
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