STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEC66680.1Pimeloyl-ACP methyl ester carboxylesterase. (274 aa)    
Predicted Functional Partners:
SEC66731.1
NADPH2:quinone reductase.
   
  0.833
SEC66565.1
2-polyprenyl-6-methoxyphenol hydroxylase.
  
  0.806
SEC66621.1
Condensation domain-containing protein.
       0.773
SEC66796.1
Chloramphenicol-sensitive protein RarD.
  
    0.755
SED56736.1
Pimeloyl-ACP methyl ester carboxylesterase.
  
  
 0.720
SED57729.1
Amino acid adenylation domain-containing protein.
   
 0.704
SEC44785.1
4-carboxymuconolactone decarboxylase.
    
 0.694
SEC66863.1
Hypothetical protein.
       0.694
SEC24167.1
L-proline dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family.
     
 0.674
SEC66916.1
Hypothetical protein.
       0.670
Your Current Organism:
Pseudomonas anguilliseptica
NCBI taxonomy Id: 53406
Other names: ATCC 33660, CCUG 35503, CIP 106711, DSM 12111, LMG 21629, LMG:21629, P. anguilliseptica
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