STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SED03652.1Protein of unknown function; Manually curated. (84 aa)    
Predicted Functional Partners:
SED03538.1
Lipase (class 3).
       0.773
SED03586.1
Hypothetical protein.
       0.773
SED03706.1
Protein of unknown function.
       0.732
SED03750.1
Type VI secretion system secreted protein VgrG.
       0.732
SED03856.1
Sigma-54 dependent transcriptional regulator.
       0.498
SED03916.1
Type VI secretion system protein VasG; Belongs to the ClpA/ClpB family.
       0.498
SED03963.1
Type VI secretion system protein ImpH.
       0.488
SED04016.1
Type VI secretion system protein ImpG.
       0.488
SED04066.1
Hypothetical protein.
       0.444
SED04113.1
Zn-binding Pro-Ala-Ala-Arg (PAAR) domain-containing protein, incolved in TypeVI secretion.
       0.444
Your Current Organism:
Pseudomonas anguilliseptica
NCBI taxonomy Id: 53406
Other names: ATCC 33660, CCUG 35503, CIP 106711, DSM 12111, LMG 21629, LMG:21629, P. anguilliseptica
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