Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
SED04474.1TRAP-type mannitol/chloroaromatic compound transport system, small permease component. (181 aa)    
Predicted Functional Partners:
SED04426.1
TRAP transporter, DctM subunit.
 
 
 0.983
SED04522.1
TRAP-type mannitol/chloroaromatic compound transport system, substrate-binding protein; Part of the tripartite ATP-independent periplasmic (TRAP) transport system.
 
    0.899
SEC65342.1
C4-dicarboxylate transporter, DctQ subunit.
   
 
  0.875
SEC76868.1
TRAP-type mannitol/chloroaromatic compound transport system, substrate-binding protein; Part of the tripartite ATP-independent periplasmic (TRAP) transport system.
 
    0.809
SEB90754.1
TRAP-type mannitol/chloroaromatic compound transport system, small permease component.
  
  
 
0.726
SEC04645.1
TRAP-type mannitol/chloroaromatic compound transport system, small permease component.
  
  
 
0.726
SED04376.1
Glucose-6-phosphate 1-epimerase; Belongs to the glucose-6-phosphate 1-epimerase family.
       0.645
SEC65405.1
C4-dicarboxylate transporter, DctM subunit.
 
  
  0.483
Your Current Organism:
Pseudomonas anguilliseptica
NCBI taxonomy Id: 53406
Other names: ATCC 33660, CCUG 35503, CIP 106711, DSM 12111, LMG 21629, LMG:21629, P. anguilliseptica
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