Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| SEC16002.1 | SEC36332.1 | SAMN05421553_0424 | SAMN05421553_0735 | Penicillin-binding protein 1B; Cell wall formation. Synthesis of cross-linked peptidoglycan from the lipid intermediates. The enzyme has a penicillin-insensitive transglycosylase N-terminal domain (formation of linear glycan strands) and a penicillin-sensitive transpeptidase C-terminal domain (cross- linking of the peptide subunits). | N-acetylmuramoyl-L-alanine amidase. | 0.623 |
| SEC16002.1 | SED08582.1 | SAMN05421553_0424 | SAMN05421553_2002 | Penicillin-binding protein 1B; Cell wall formation. Synthesis of cross-linked peptidoglycan from the lipid intermediates. The enzyme has a penicillin-insensitive transglycosylase N-terminal domain (formation of linear glycan strands) and a penicillin-sensitive transpeptidase C-terminal domain (cross- linking of the peptide subunits). | D-alanyl-D-alanine endopeptidase (penicillin-binding protein 7); Belongs to the peptidase S11 family. | 0.538 |
| SEC16002.1 | SED24755.1 | SAMN05421553_0424 | SAMN05421553_2309 | Penicillin-binding protein 1B; Cell wall formation. Synthesis of cross-linked peptidoglycan from the lipid intermediates. The enzyme has a penicillin-insensitive transglycosylase N-terminal domain (formation of linear glycan strands) and a penicillin-sensitive transpeptidase C-terminal domain (cross- linking of the peptide subunits). | Penicillin-binding protein 1A. | 0.829 |
| SEC16002.1 | SEE16230.1 | SAMN05421553_0424 | SAMN05421553_4173 | Penicillin-binding protein 1B; Cell wall formation. Synthesis of cross-linked peptidoglycan from the lipid intermediates. The enzyme has a penicillin-insensitive transglycosylase N-terminal domain (formation of linear glycan strands) and a penicillin-sensitive transpeptidase C-terminal domain (cross- linking of the peptide subunits). | Toxin homologue of phage lysozyme. | 0.428 |
| SEC16002.1 | ftsI | SAMN05421553_0424 | SAMN05421553_2811 | Penicillin-binding protein 1B; Cell wall formation. Synthesis of cross-linked peptidoglycan from the lipid intermediates. The enzyme has a penicillin-insensitive transglycosylase N-terminal domain (formation of linear glycan strands) and a penicillin-sensitive transpeptidase C-terminal domain (cross- linking of the peptide subunits). | Peptidoglycan synthetase FtsI; Catalyzes cross-linking of the peptidoglycan cell wall at the division septum. | 0.950 |
| SEC16002.1 | mrdA | SAMN05421553_0424 | SAMN05421553_2558 | Penicillin-binding protein 1B; Cell wall formation. Synthesis of cross-linked peptidoglycan from the lipid intermediates. The enzyme has a penicillin-insensitive transglycosylase N-terminal domain (formation of linear glycan strands) and a penicillin-sensitive transpeptidase C-terminal domain (cross- linking of the peptide subunits). | Penicillin-binding protein 2; Catalyzes cross-linking of the peptidoglycan cell wall. Belongs to the transpeptidase family. MrdA subfamily. | 0.874 |
| SEC36332.1 | SEC16002.1 | SAMN05421553_0735 | SAMN05421553_0424 | N-acetylmuramoyl-L-alanine amidase. | Penicillin-binding protein 1B; Cell wall formation. Synthesis of cross-linked peptidoglycan from the lipid intermediates. The enzyme has a penicillin-insensitive transglycosylase N-terminal domain (formation of linear glycan strands) and a penicillin-sensitive transpeptidase C-terminal domain (cross- linking of the peptide subunits). | 0.623 |
| SEC36332.1 | SEC91749.1 | SAMN05421553_0735 | SAMN05421553_1671 | N-acetylmuramoyl-L-alanine amidase. | Spore maturation protein SpmA. | 0.451 |
| SEC36332.1 | SED08582.1 | SAMN05421553_0735 | SAMN05421553_2002 | N-acetylmuramoyl-L-alanine amidase. | D-alanyl-D-alanine endopeptidase (penicillin-binding protein 7); Belongs to the peptidase S11 family. | 0.654 |
| SEC36332.1 | SED24755.1 | SAMN05421553_0735 | SAMN05421553_2309 | N-acetylmuramoyl-L-alanine amidase. | Penicillin-binding protein 1A. | 0.510 |
| SEC36332.1 | SED44632.1 | SAMN05421553_0735 | SAMN05421553_2674 | N-acetylmuramoyl-L-alanine amidase. | AmpD protein. | 0.444 |
| SEC36332.1 | SEE16230.1 | SAMN05421553_0735 | SAMN05421553_4173 | N-acetylmuramoyl-L-alanine amidase. | Toxin homologue of phage lysozyme. | 0.858 |
| SEC36332.1 | ftsI | SAMN05421553_0735 | SAMN05421553_2811 | N-acetylmuramoyl-L-alanine amidase. | Peptidoglycan synthetase FtsI; Catalyzes cross-linking of the peptidoglycan cell wall at the division septum. | 0.707 |
| SEC36332.1 | mrdA | SAMN05421553_0735 | SAMN05421553_2558 | N-acetylmuramoyl-L-alanine amidase. | Penicillin-binding protein 2; Catalyzes cross-linking of the peptidoglycan cell wall. Belongs to the transpeptidase family. MrdA subfamily. | 0.707 |
| SEC91749.1 | SEC36332.1 | SAMN05421553_1671 | SAMN05421553_0735 | Spore maturation protein SpmA. | N-acetylmuramoyl-L-alanine amidase. | 0.451 |
| SEC91749.1 | SED08582.1 | SAMN05421553_1671 | SAMN05421553_2002 | Spore maturation protein SpmA. | D-alanyl-D-alanine endopeptidase (penicillin-binding protein 7); Belongs to the peptidase S11 family. | 0.747 |
| SEC91749.1 | SEE42377.1 | SAMN05421553_1671 | SAMN05421553_4759 | Spore maturation protein SpmA. | D-alanyl-D-alanine carboxypeptidase / D-alanyl-D-alanine-endopeptidase (penicillin-binding protein 4). | 0.410 |
| SED08582.1 | SEC16002.1 | SAMN05421553_2002 | SAMN05421553_0424 | D-alanyl-D-alanine endopeptidase (penicillin-binding protein 7); Belongs to the peptidase S11 family. | Penicillin-binding protein 1B; Cell wall formation. Synthesis of cross-linked peptidoglycan from the lipid intermediates. The enzyme has a penicillin-insensitive transglycosylase N-terminal domain (formation of linear glycan strands) and a penicillin-sensitive transpeptidase C-terminal domain (cross- linking of the peptide subunits). | 0.538 |
| SED08582.1 | SEC36332.1 | SAMN05421553_2002 | SAMN05421553_0735 | D-alanyl-D-alanine endopeptidase (penicillin-binding protein 7); Belongs to the peptidase S11 family. | N-acetylmuramoyl-L-alanine amidase. | 0.654 |
| SED08582.1 | SEC91749.1 | SAMN05421553_2002 | SAMN05421553_1671 | D-alanyl-D-alanine endopeptidase (penicillin-binding protein 7); Belongs to the peptidase S11 family. | Spore maturation protein SpmA. | 0.747 |
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