Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SED09215.1Protein of unknown function. (207 aa)    
Predicted Functional Partners:
SED08986.1
AAA domain-containing protein.
 
    0.939
SED09101.1
Hypothetical protein.
 
    0.929
SED09040.1
Hypothetical protein.
 
     0.918
SED09547.1
Mu-like prophage protein gp16.
 
    0.857
SED80795.1
Mu-like prophage protein gp16.
 
    0.781
SED48177.1
Mu-like prophage protein gp16.
 
    0.780
SED75166.1
Hypothetical protein.
 
    0.779
SED74042.1
Mu-like prophage protein gp16.
 
    0.778
SED36302.1
Phage Mu protein F like protein.
 
     0.777
SED10197.1
Phage Mu protein F like protein.
 
     0.776
Your Current Organism:
Pseudomonas anguilliseptica
NCBI taxonomy Id: 53406
Other names: ATCC 33660, CCUG 35503, CIP 106711, DSM 12111, LMG 21629, LMG:21629, P. anguilliseptica
Server load: low (8%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.