SED17316.1 protein (Pseudomonas anguilliseptica)

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SED17316.1

Small GTP-binding protein domain-containing protein. (455 aa)

Predicted Functional Partners:

SED17371.1

0.970

dnaG

0.847

rplA

0.815

rplB

0.797

rplN

0.796

rpmH

0.790

rplT

0.790

rplR

0.789

rplQ

0.788

rplO

0.788

Your Current Organism:

Pseudomonas anguilliseptica

NCBI taxonomy Id: 53406
Other names: ATCC 33660, CCUG 35503, CIP 106711, DSM 12111, LMG 21629, LMG:21629, P. anguilliseptica

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
SED17316.1	SED17371.1	SAMN05421553_2164	SAMN05421553_2165	Small GTP-binding protein domain-containing protein.	Protein of unknown function.	0.970
SED17316.1	dnaG	SAMN05421553_2164	SAMN05421553_1055	Small GTP-binding protein domain-containing protein.	DNA primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication.	0.847
SED17316.1	rplA	SAMN05421553_2164	SAMN05421553_0980	Small GTP-binding protein domain-containing protein.	LSU ribosomal protein L1P; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release.	0.815
SED17316.1	rplB	SAMN05421553_2164	SAMN05421553_0964	Small GTP-binding protein domain-containing protein.	LSU ribosomal protein L2P; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family.	0.797
SED17316.1	rplN	SAMN05421553_2164	SAMN05421553_0957	Small GTP-binding protein domain-containing protein.	LSU ribosomal protein L14P; Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome; Belongs to the universal ribosomal protein uL14 family.	0.796
SED17316.1	rplO	SAMN05421553_2164	SAMN05421553_0948	Small GTP-binding protein domain-containing protein.	LSU ribosomal protein L15P; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family.	0.788
SED17316.1	rplQ	SAMN05421553_2164	SAMN05421553_0940	Small GTP-binding protein domain-containing protein.	LSU ribosomal protein L17P.	0.788
SED17316.1	rplR	SAMN05421553_2164	SAMN05421553_0951	Small GTP-binding protein domain-containing protein.	LSU ribosomal protein L18P; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance.	0.789
SED17316.1	rplT	SAMN05421553_2164	SAMN05421553_3743	Small GTP-binding protein domain-containing protein.	LSU ribosomal protein L20P; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.	0.790
SED17316.1	rpmH	SAMN05421553_2164	SAMN05421553_1527	Small GTP-binding protein domain-containing protein.	LSU ribosomal protein L34P; Belongs to the bacterial ribosomal protein bL34 family.	0.790
SED17371.1	SED17316.1	SAMN05421553_2165	SAMN05421553_2164	Protein of unknown function.	Small GTP-binding protein domain-containing protein.	0.970
dnaG	SED17316.1	SAMN05421553_1055	SAMN05421553_2164	DNA primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication.	Small GTP-binding protein domain-containing protein.	0.847
dnaG	rplA	SAMN05421553_1055	SAMN05421553_0980	DNA primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication.	LSU ribosomal protein L1P; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release.	0.558
dnaG	rplB	SAMN05421553_1055	SAMN05421553_0964	DNA primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication.	LSU ribosomal protein L2P; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family.	0.509
dnaG	rplN	SAMN05421553_1055	SAMN05421553_0957	DNA primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication.	LSU ribosomal protein L14P; Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome; Belongs to the universal ribosomal protein uL14 family.	0.548
dnaG	rplT	SAMN05421553_1055	SAMN05421553_3743	DNA primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication.	LSU ribosomal protein L20P; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.	0.627
rplA	SED17316.1	SAMN05421553_0980	SAMN05421553_2164	LSU ribosomal protein L1P; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release.	Small GTP-binding protein domain-containing protein.	0.815
rplA	dnaG	SAMN05421553_0980	SAMN05421553_1055	LSU ribosomal protein L1P; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release.	DNA primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication.	0.558
rplA	rplB	SAMN05421553_0980	SAMN05421553_0964	LSU ribosomal protein L1P; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release.	LSU ribosomal protein L2P; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family.	0.998
rplA	rplN	SAMN05421553_0980	SAMN05421553_0957	LSU ribosomal protein L1P; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release.	LSU ribosomal protein L14P; Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome; Belongs to the universal ribosomal protein uL14 family.	0.998