STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SED17430.1Glycerophosphoryl diester phosphodiesterase. (382 aa)    
Predicted Functional Partners:
guaA
GMP synthase (glutamine-hydrolyzing); Catalyzes the synthesis of GMP from XMP.
  
 
 0.741
eutC
Ethanolamine ammonia-lyase light chain; Belongs to the EutC family.
     
  0.731
SED04837.1
Phosphate transport system permease protein.
  
  
 0.730
SEE16798.1
6-pyruvoyltetrahydropterin/6- carboxytetrahydropterin synthase.
     
  0.667
SEE47586.1
Homodimeric glycerol 3-phosphate dehydrogenase (quinone); Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family.
  
 0.667
folE
GTP cyclohydrolase I.
     
  0.657
SEB94972.1
D-erythro-7,8-dihydroneopterin triphosphate epimerase.
     
  0.657
SEC55547.1
Dihydroneopterin aldolase; Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin.
     
  0.657
SED33092.1
Ethanolamine ammonia-lyase heavy chain.
     
  0.657
SED33522.1
Ethanolamine ammonia-lyase heavy chain.
     
  0.657
Your Current Organism:
Pseudomonas anguilliseptica
NCBI taxonomy Id: 53406
Other names: ATCC 33660, CCUG 35503, CIP 106711, DSM 12111, LMG 21629, LMG:21629, P. anguilliseptica
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