Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SED18503.1Hypothetical protein. (181 aa)    
Predicted Functional Partners:
SED18447.1
Choline dehydrogenase.
 
  
 0.995
SED18550.1
Coniferyl-aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
 
  
 0.989
SED18612.1
Transcriptional regulator, TetR family.
 
  
 0.892
SEE17046.1
Transcriptional regulator, GntR family.
  
     0.679
SEE24232.1
Lysophospholipase, alpha-beta hydrolase superfamily.
  
     0.668
SED55847.1
Hypothetical protein.
  
     0.653
SEE06039.1
Hypothetical protein.
  
     0.635
coaD
Phosphopantetheine adenylyltransferase; Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate. Belongs to the bacterial CoaD family.
       0.620
SEE35655.1
Hypothetical protein.
  
     0.610
SEC99375.1
Transcriptional regulator, TetR family.
 
  
 0.588
Your Current Organism:
Pseudomonas anguilliseptica
NCBI taxonomy Id: 53406
Other names: ATCC 33660, CCUG 35503, CIP 106711, DSM 12111, LMG 21629, LMG:21629, P. anguilliseptica
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