STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SED30768.1Protein of unknown function. (583 aa)    
Predicted Functional Partners:
SED30831.1
Protein of unknown function.
 
    0.957
SED56501.1
Protein of unknown function; Non-canonical start codon; manually curated.
 
    0.873
SED82742.1
Protein of unknown function.
 
    0.873
SED19512.1
Protein of unknown function.
 
    0.872
SED82784.1
Uncharacterized protein.
 
    0.853
SED82825.1
Hypothetical protein.
 
    0.784
tolB
TolB protein; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity.
    
 
 0.716
SED76998.1
Phospholipid-binding lipoprotein MlaA.
    
 
 0.688
SED77066.1
Hypothetical protein.
    
 
 0.688
SED96012.1
Phospholipid-binding lipoprotein MlaA.
    
 
 0.688
Your Current Organism:
Pseudomonas anguilliseptica
NCBI taxonomy Id: 53406
Other names: ATCC 33660, CCUG 35503, CIP 106711, DSM 12111, LMG 21629, LMG:21629, P. anguilliseptica
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