Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
SED57850.1Amino acid adenylation domain-containing protein. (2998 aa)    
Predicted Functional Partners:
SED57974.1
MbtH protein.
 
 0.942
SED57729.1
Amino acid adenylation domain-containing protein.
 
0.937
SED57616.1
Amino acid adenylation domain-containing protein.
 
0.931
SED58038.1
Surfactin synthase thioesterase subunit.
 
 
 0.905
SEE73064.1
MbtH protein.
 
 0.894
SED57792.1
Amino acid adenylation domain-containing protein.
 
 
 
0.876
SEE73103.1
Surfactin synthase thioesterase subunit.
 
 
 0.825
SEE34518.1
Bifunctional isochorismate lyase / aryl carrier protein; Non-canonical start codon; manually curated.
 
 
 0.805
SED57916.1
Taurine dioxygenase, alpha-ketoglutarate-dependent.
 
   
0.801
SEE34473.1
Amino acid adenylation domain-containing protein.
 
 
 
0.774
Your Current Organism:
Pseudomonas anguilliseptica
NCBI taxonomy Id: 53406
Other names: ATCC 33660, CCUG 35503, CIP 106711, DSM 12111, LMG 21629, LMG:21629, P. anguilliseptica
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