STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SED78536.1Phage tail protein, P2 protein I family. (211 aa)    
Predicted Functional Partners:
SED78623.1
Hypothetical protein.
 
 
 0.987
SED78584.1
Phage-related baseplate assembly protein.
 
 
 0.986
SED78492.1
Phage tail-collar fibre protein.
 
  
 0.975
SED50262.1
Hypothetical protein.
 
 
 0.961
SED75889.1
Hypothetical protein.
 
 
 0.961
SED79077.1
Hypothetical protein.
 
 
 0.961
SED50323.1
Hypothetical protein.
 
   0.951
SED75941.1
Hypothetical protein.
 
   0.951
SED79027.1
Hypothetical protein.
 
   0.951
SED50772.1
Phage baseplate assembly protein V.
 
  
 0.950
Your Current Organism:
Pseudomonas anguilliseptica
NCBI taxonomy Id: 53406
Other names: ATCC 33660, CCUG 35503, CIP 106711, DSM 12111, LMG 21629, LMG:21629, P. anguilliseptica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.