STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SED80255.1Hypothetical protein. (71 aa)    
Predicted Functional Partners:
SED80304.1
Hypothetical protein.
       0.534
SED80351.1
Hypothetical protein.
       0.534
SED80396.1
Hypothetical protein.
       0.517
SED80456.1
Integrase core domain-containing protein.
       0.487
SED80502.1
Type II secretion system protein A.
       0.487
SED80552.1
Hypothetical protein.
       0.487
SED80599.1
Hypothetical protein.
       0.487
SED80648.1
Protein of unknown function.
       0.487
SED80696.1
Protein of unknown function.
       0.487
Your Current Organism:
Pseudomonas anguilliseptica
NCBI taxonomy Id: 53406
Other names: ATCC 33660, CCUG 35503, CIP 106711, DSM 12111, LMG 21629, LMG:21629, P. anguilliseptica
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.