Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SEB99905.1 | SEE07452.1 | SAMN05421553_0153 | SAMN05421553_3976 | Phosphate-selective porin OprO and OprP. | Protein of unknown function. | 0.451 |
SEB99905.1 | phnC-2 | SAMN05421553_0153 | SAMN05421553_2978 | Phosphate-selective porin OprO and OprP. | Phosphonate transport system ATP-binding protein; Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphonates importer (TC 3.A.1.9.1) family. | 0.497 |
SEE07242.1 | SEE07294.1 | SAMN05421553_3972 | SAMN05421553_3973 | Hypothetical protein; Belongs to the pirin family. | Putative redox protein. | 0.839 |
SEE07242.1 | SEE07347.1 | SAMN05421553_3972 | SAMN05421553_3974 | Hypothetical protein; Belongs to the pirin family. | Amino acid ABC transporter substrate-binding protein, PAAT family. | 0.773 |
SEE07242.1 | SEE07399.1 | SAMN05421553_3972 | SAMN05421553_3975 | Hypothetical protein; Belongs to the pirin family. | Amidohydrolase. | 0.568 |
SEE07242.1 | SEE07452.1 | SAMN05421553_3972 | SAMN05421553_3976 | Hypothetical protein; Belongs to the pirin family. | Protein of unknown function. | 0.493 |
SEE07294.1 | SEE07242.1 | SAMN05421553_3973 | SAMN05421553_3972 | Putative redox protein. | Hypothetical protein; Belongs to the pirin family. | 0.839 |
SEE07294.1 | SEE07347.1 | SAMN05421553_3973 | SAMN05421553_3974 | Putative redox protein. | Amino acid ABC transporter substrate-binding protein, PAAT family. | 0.774 |
SEE07294.1 | SEE07399.1 | SAMN05421553_3973 | SAMN05421553_3975 | Putative redox protein. | Amidohydrolase. | 0.594 |
SEE07294.1 | SEE07452.1 | SAMN05421553_3973 | SAMN05421553_3976 | Putative redox protein. | Protein of unknown function. | 0.452 |
SEE07347.1 | SEE07242.1 | SAMN05421553_3974 | SAMN05421553_3972 | Amino acid ABC transporter substrate-binding protein, PAAT family. | Hypothetical protein; Belongs to the pirin family. | 0.773 |
SEE07347.1 | SEE07294.1 | SAMN05421553_3974 | SAMN05421553_3973 | Amino acid ABC transporter substrate-binding protein, PAAT family. | Putative redox protein. | 0.774 |
SEE07347.1 | SEE07399.1 | SAMN05421553_3974 | SAMN05421553_3975 | Amino acid ABC transporter substrate-binding protein, PAAT family. | Amidohydrolase. | 0.560 |
SEE07347.1 | SEE07452.1 | SAMN05421553_3974 | SAMN05421553_3976 | Amino acid ABC transporter substrate-binding protein, PAAT family. | Protein of unknown function. | 0.430 |
SEE07399.1 | SEE07242.1 | SAMN05421553_3975 | SAMN05421553_3972 | Amidohydrolase. | Hypothetical protein; Belongs to the pirin family. | 0.568 |
SEE07399.1 | SEE07294.1 | SAMN05421553_3975 | SAMN05421553_3973 | Amidohydrolase. | Putative redox protein. | 0.594 |
SEE07399.1 | SEE07347.1 | SAMN05421553_3975 | SAMN05421553_3974 | Amidohydrolase. | Amino acid ABC transporter substrate-binding protein, PAAT family. | 0.560 |
SEE07399.1 | SEE07452.1 | SAMN05421553_3975 | SAMN05421553_3976 | Amidohydrolase. | Protein of unknown function. | 0.634 |
SEE07452.1 | SEB99905.1 | SAMN05421553_3976 | SAMN05421553_0153 | Protein of unknown function. | Phosphate-selective porin OprO and OprP. | 0.451 |
SEE07452.1 | SEE07242.1 | SAMN05421553_3976 | SAMN05421553_3972 | Protein of unknown function. | Hypothetical protein; Belongs to the pirin family. | 0.493 |
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