STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
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Gene Fusion
Cooccurrence
Coexpression
Experiments
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[Homology]
Score
SEE13014.1Triacylglycerol lipase. (314 aa)    
Predicted Functional Partners:
lifO
Lipase chaperone LimK; May be involved in the folding of the extracellular lipase during its passage through the periplasm; Belongs to the lipase chaperone family.
 
 
 0.984
lifO-2
Lipase chaperone LimK; May be involved in the folding of the extracellular lipase during its passage through the periplasm; Belongs to the lipase chaperone family.
 
 
 0.941
SEE07788.1
Long-chain acyl-CoA synthetase (AMP-forming).
   
 
 0.672
SEE30070.1
Long-chain acyl-CoA synthetase.
   
 
 0.672
SEB92297.1
Diacylglycerol kinase; Recycling of diacylglycerol produced during the turnover of membrane phospholipid.
     
 0.661
SED63849.1
Long-chain acyl-CoA synthetase.
   
 
  0.661
SEE45362.1
Glycosyltransferase involved in cell wall bisynthesis.
     
  0.660
SEE41386.1
Lipid kinase YegS; Probably phosphorylates lipids; the in vivo substrate is unknown; Belongs to the diacylglycerol/lipid kinase family. YegS lipid kinase subfamily.
     
 0.541
SED03538.1
Lipase (class 3).
  
  
 0.534
SEE24902.1
Putative MetA-pathway of phenol degradation.
  
    0.525
Your Current Organism:
Pseudomonas anguilliseptica
NCBI taxonomy Id: 53406
Other names: ATCC 33660, CCUG 35503, CIP 106711, DSM 12111, LMG 21629, LMG:21629, P. anguilliseptica
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