SEE23966.1 protein (Pseudomonas anguilliseptica)

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Score

SEE23966.1

RNA polymerase sigma-70 factor, ECF subfamily. (199 aa)

Predicted Functional Partners:

SEE24008.1

0.938

SED70491.1

0.880

SEE24063.1

0.780

SEE07196.1

0.719

SEB96140.1

0.700

rpoB

0.694

rpoC

0.688

SEE24164.1

0.688

rpoA

0.678

SEE24114.1

0.630

Your Current Organism:

Pseudomonas anguilliseptica

NCBI taxonomy Id: 53406
Other names: ATCC 33660, CCUG 35503, CIP 106711, DSM 12111, LMG 21629, LMG:21629, P. anguilliseptica

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... functional annotations:

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
SEB96140.1	SEE07196.1	SAMN05421553_0093	SAMN05421553_3971	Putative zinc-finger.	RNA polymerase sigma-70 factor, ECF subfamily.	0.700
SEB96140.1	SEE23966.1	SAMN05421553_0093	SAMN05421553_4338	Putative zinc-finger.	RNA polymerase sigma-70 factor, ECF subfamily.	0.700
SED70491.1	SEE07196.1	SAMN05421553_3157	SAMN05421553_3971	Anti sigma-E protein, RseA.	RNA polymerase sigma-70 factor, ECF subfamily.	0.802
SED70491.1	SEE23966.1	SAMN05421553_3157	SAMN05421553_4338	Anti sigma-E protein, RseA.	RNA polymerase sigma-70 factor, ECF subfamily.	0.880
SEE07196.1	SEB96140.1	SAMN05421553_3971	SAMN05421553_0093	RNA polymerase sigma-70 factor, ECF subfamily.	Putative zinc-finger.	0.700
SEE07196.1	SED70491.1	SAMN05421553_3971	SAMN05421553_3157	RNA polymerase sigma-70 factor, ECF subfamily.	Anti sigma-E protein, RseA.	0.802
SEE07196.1	SEE23966.1	SAMN05421553_3971	SAMN05421553_4338	RNA polymerase sigma-70 factor, ECF subfamily.	RNA polymerase sigma-70 factor, ECF subfamily.	0.719
SEE07196.1	rpoA	SAMN05421553_3971	SAMN05421553_0941	RNA polymerase sigma-70 factor, ECF subfamily.	DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.678
SEE07196.1	rpoB	SAMN05421553_3971	SAMN05421553_0975	RNA polymerase sigma-70 factor, ECF subfamily.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.697
SEE07196.1	rpoC	SAMN05421553_3971	SAMN05421553_0974	RNA polymerase sigma-70 factor, ECF subfamily.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.688
SEE23966.1	SEB96140.1	SAMN05421553_4338	SAMN05421553_0093	RNA polymerase sigma-70 factor, ECF subfamily.	Putative zinc-finger.	0.700
SEE23966.1	SED70491.1	SAMN05421553_4338	SAMN05421553_3157	RNA polymerase sigma-70 factor, ECF subfamily.	Anti sigma-E protein, RseA.	0.880
SEE23966.1	SEE07196.1	SAMN05421553_4338	SAMN05421553_3971	RNA polymerase sigma-70 factor, ECF subfamily.	RNA polymerase sigma-70 factor, ECF subfamily.	0.719
SEE23966.1	SEE24008.1	SAMN05421553_4338	SAMN05421553_4339	RNA polymerase sigma-70 factor, ECF subfamily.	Conserved TM helix.	0.938
SEE23966.1	SEE24063.1	SAMN05421553_4338	SAMN05421553_4340	RNA polymerase sigma-70 factor, ECF subfamily.	Hypothetical protein.	0.780
SEE23966.1	SEE24114.1	SAMN05421553_4338	SAMN05421553_4341	RNA polymerase sigma-70 factor, ECF subfamily.	CorA-like Mg2+ transporter protein.	0.630
SEE23966.1	SEE24164.1	SAMN05421553_4338	SAMN05421553_4342	RNA polymerase sigma-70 factor, ECF subfamily.	Regulator of ribonuclease activity A; Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions.	0.688
SEE23966.1	rpoA	SAMN05421553_4338	SAMN05421553_0941	RNA polymerase sigma-70 factor, ECF subfamily.	DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.678
SEE23966.1	rpoB	SAMN05421553_4338	SAMN05421553_0975	RNA polymerase sigma-70 factor, ECF subfamily.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.694
SEE23966.1	rpoC	SAMN05421553_4338	SAMN05421553_0974	RNA polymerase sigma-70 factor, ECF subfamily.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.688