Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
Co-expression
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[Homology]
Score
SEE24650.1Uncharacterized conserved protein. (178 aa)    
Predicted Functional Partners:
SEE24779.1
alpha-L-glutamate ligase-related protein.
 
   
 0.953
SEE24703.1
Inactive transglutaminase fused to 7 transmembrane helices.
 
    0.943
rimK
SSU ribosomal protein S6P modification protein; Belongs to the RimK family.
 
     0.764
SEE24601.1
Transcriptional regulator, GntR family.
       0.481
SEE24440.1
2-methylcitrate dehydratase (trans-methylaconitate-forming).
       0.448
SEE24500.1
2-methylcitrate synthase; Belongs to the citrate synthase family.
       0.448
prpB
Methylisocitrate lyase; Catalyzes the thermodynamically favored C-C bond cleavage of (2R,3S)-2-methylisocitrate to yield pyruvate and succinate. Belongs to the isocitrate lyase/PEP mutase superfamily. Methylisocitrate lyase family.
  
    0.448
SEE24841.1
Transposase.
       0.429
Your Current Organism:
Pseudomonas anguilliseptica
NCBI taxonomy Id: 53406
Other names: ATCC 33660, CCUG 35503, CIP 106711, DSM 12111, LMG 21629, LMG:21629, P. anguilliseptica
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