STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEE26808.1Protein of unknown function. (174 aa)    
Predicted Functional Partners:
SEE26857.1
Glutamine amidotransferase.
  
    0.886
SEE26907.1
Histidine triad (HIT) family protein.
       0.795
SEC94147.1
Transcriptional regulator, TetR family.
  
     0.653
SEC09195.1
Hypothetical protein.
  
     0.647
SEC09309.1
Hypothetical protein.
  
     0.645
SEC09252.1
Hypothetical protein.
  
     0.626
SED69790.1
Hypothetical protein.
  
     0.619
SEC37043.1
HDOD domain-containing protein.
  
     0.574
SEC42534.1
Uncharacterized conserved protein, contains GH25 family domain.
  
     0.546
SEC24315.1
Nucleoside-specific outer membrane channel protein Tsx.
  
     0.510
Your Current Organism:
Pseudomonas anguilliseptica
NCBI taxonomy Id: 53406
Other names: ATCC 33660, CCUG 35503, CIP 106711, DSM 12111, LMG 21629, LMG:21629, P. anguilliseptica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.