STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SEE37375.1Citronellol/citronellal dehydrogenase. (272 aa)    
Predicted Functional Partners:
SEE37172.1
Citronellol/citronellal dehydrogenase.
 
 
 
0.933
SEB93581.1
citronellyl-CoA synthetase.
 
 
  0.858
SEE37619.1
citronellyl-CoA synthetase.
 
 
  0.849
SED25187.1
Glutamate synthase (NADPH) large subunit.
    
  0.749
SEE37342.1
geranyl-CoA carboxylase alpha subunit.
    
  0.672
gcvP
Glycine dehydrogenase (decarboxylating); The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family.
     
  0.604
SEE37123.1
Protein of unknown function.
 
  
  0.547
SEB94027.1
NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
 
0.507
SEE37210.1
geranyl-CoA carboxylase beta subunit.
 
  
  0.495
SED15721.1
fatty-acyl-CoA synthase.
   
  0.489
Your Current Organism:
Pseudomonas anguilliseptica
NCBI taxonomy Id: 53406
Other names: ATCC 33660, CCUG 35503, CIP 106711, DSM 12111, LMG 21629, LMG:21629, P. anguilliseptica
Server load: medium (56%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.