STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEE37375.1Citronellol/citronellal dehydrogenase. (272 aa)    
Predicted Functional Partners:
SEE37172.1
Citronellol/citronellal dehydrogenase.
 
 
 
0.817
SED25187.1
Glutamate synthase (NADPH) large subunit.
    
  0.718
SED26185.1
Acyl-coenzyme A synthetase/AMP-(fatty) acid ligase.
     
 0.714
SEB93581.1
citronellyl-CoA synthetase.
 
  
  0.676
SEE37619.1
citronellyl-CoA synthetase.
 
  
  0.654
SEE37342.1
geranyl-CoA carboxylase alpha subunit.
    
  0.653
SEB94027.1
NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
 
0.645
SEB96286.1
Beta-ketodecanoyl-[acyl-carrier-protein] synthase.
  
 
 0.546
fabZ
3-hydroxyacyl-[acyl-carrier-protein] dehydratase; Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs.
     
 0.521
SED57729.1
Amino acid adenylation domain-containing protein.
  
 
 0.501
Your Current Organism:
Pseudomonas anguilliseptica
NCBI taxonomy Id: 53406
Other names: ATCC 33660, CCUG 35503, CIP 106711, DSM 12111, LMG 21629, LMG:21629, P. anguilliseptica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.