STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SEE43605.1Glycosyltransferase involved in cell wall bisynthesis. (401 aa)    
Predicted Functional Partners:
SEE43646.1
Membrane protein involved in the export of O-antigen and teichoic acid.
 
 
 0.919
SEE43483.1
Asparagine synthase (glutamine-hydrolysing); Manually curated.
 
  
  0.798
SEE43528.1
Glycosyltransferase involved in cell wall bisynthesis.
 
    
0.783
SEE43562.1
Nucleoside-diphosphate-sugar epimerase; Manually curated.
 
 
  0.777
SEE43437.1
Glycosyltransferase involved in cell wall bisynthesis.
       0.697
SEE43699.1
Hypothetical protein.
 
    
0.615
SEE43738.1
methionyl-tRNA formyltransferase.
  
 
 0.585
ggpS
Glucosyl-glycerol phosphate synthase; Involved in salt tolerance by producing GG-phosphate from ADP-glucose and glycerol-3-phosphate (G3P), an intermediate in the synthesis of the osmolyte glucosylglycerol (GG).
   
 0.578
SEC64954.1
Glucose-1-phosphate thymidylyltransferase; Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis. Belongs to the glucose-1-phosphate thymidylyltransferase family.
  
 
 0.514
SEC28963.1
Mannose-1-phosphate guanylyltransferase (GDP); Belongs to the mannose-6-phosphate isomerase type 2 family.
  
 
 0.511
Your Current Organism:
Pseudomonas anguilliseptica
NCBI taxonomy Id: 53406
Other names: ATCC 33660, CCUG 35503, CIP 106711, DSM 12111, LMG 21629, LMG:21629, P. anguilliseptica
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