STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ANI13962.1Translation initiation factor 2 (IF-2, GTPase); Derived by automated computational analysis using gene prediction method: Protein Homology. (137 aa)    
Predicted Functional Partners:
ompR_2
DNA-binding response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.790
ANI13963.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.678
yciB
Septation protein A; Involved in cell division; probably involved in intracellular septation; Belongs to the YciB family.
       0.575
ANI13960.1
LTXXQ domain protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.544
ANI18390.1
Phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.450
tsaC_2
threonylcarbamoyl-AMP synthase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the SUA5 family.
       0.450
pfeS_2
Two-component sensor histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.414
Your Current Organism:
Pseudomonas citronellolis
NCBI taxonomy Id: 53408
Other names: ATCC 13674, CCUG 17933, CFBP 5585, CIP 104381, DSM 50332, IAM 15129, JCM 21587, LMG 18378, LMG:18378, NBRC 103043, NRRL B-2504, P. citronellolis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.