STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001613405_07066Unannotated protein. (496 aa)    
Predicted Functional Partners:
GCA_001613405_04442
Unannotated protein.
  
     0.668
GCA_001613405_02235
Unannotated protein.
  
     0.644
GCA_001613405_05503
Unannotated protein.
  
    0.621
GCA_001613405_05916
Unannotated protein.
 
     0.608
GCA_001613405_02198
Unannotated protein.
  
    0.604
GCA_001613405_04125
Unannotated protein.
  
    0.604
GCA_001613405_07792
Unannotated protein.
  
    0.599
GCA_001613405_04394
Unannotated protein.
  
    0.594
GCA_001613405_00597
Unannotated protein.
  
     0.584
GCA_001613405_02199
Unannotated protein.
  
     0.581
Your Current Organism:
Nocardia crassostreae
NCBI taxonomy Id: 53428
Other names: ATCC 700418, CIP 105895, DSM 44597, JCM 10500, N. crassostreae, NBRC 100342, strain NB4H
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.