STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BOX37_17765annotation not available (349 aa)    
Predicted Functional Partners:
BOX37_01270
annotation not available
     
 0.905
BOX37_24230
annotation not available
  
  
 
0.902
BOX37_15490
annotation not available
     
 0.712
BOX37_28925
annotation not available
    
 0.659
BOX37_11870
annotation not available
    
 0.625
BOX37_06470
annotation not available
 
   
 0.578
BOX37_17760
annotation not available
       0.553
BOX37_31545
annotation not available
  
     0.509
BOX37_14660
annotation not available
 
  
 0.507
BOX37_17770
annotation not available
       0.481
Your Current Organism:
Nocardia salmonicida
NCBI taxonomy Id: 53431
Other names: ATCC 27463, CBS 694.72, CCUG 46121 [[Nocardia cummidelens]], CCUG 46295 [[Nocardia cummidelens]], CIP 104517, CIP 107223 [[Nocardia soli]], CIP 107225 [[Nocardia cummidelens]], DSM 40472, DSM 44488 [[Nocardia soli]], DSM 44490 [[Nocardia cummidelens]], IFO 13393, ISP 5472, JCM 11439 [[Nocardia cummidelens]], JCM 11441 [[Nocardia soli]], JCM 4826, N. salmonicida, NBRC 100376 [[Nocardia soli]], NBRC 100378 [[Nocardia cummidelens]], NBRC 13393, NCIMB 13758 [[Nocardia cummidelens]], NCIMB 13760 [[Nocardia soli]], NRRL B-12385, NRRL B-2778, Nocardia cummidelens, Nocardia cummidelens Maldonado et al. 2001, Nocardia soli, Nocardia soli Maldonado et al. 2001, Streptomyces salmonicida, strain R89 [[Nocardia cummidelens]], strain W30 [[Nocardia soli]]
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.