Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CUM68981.1 | CUM68988.1 | ERS852414_00071 | ERS852414_00072 | Methionine gamma-lyase. | N-methyltryptophan oxidase. | 0.826 |
CUM68981.1 | CUM68993.1 | ERS852414_00071 | ERS852414_00073 | Methionine gamma-lyase. | Uncharacterized conserved protein. | 0.826 |
CUM68981.1 | hflX | ERS852414_00071 | ERS852414_03283 | Methionine gamma-lyase. | GTP-binding protein HflX; GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. HflX GTPase family. | 0.487 |
CUM68981.1 | miaA | ERS852414_00071 | ERS852414_00070 | Methionine gamma-lyase. | tRNA dimethylallyltransferase; Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A); Belongs to the IPP transferase family. | 0.873 |
CUM68981.1 | miaB_1 | ERS852414_00071 | ERS852414_00067 | Methionine gamma-lyase. | (Dimethylallyl)adenosine tRNA methylthiotransferase MiaB; Catalyzes the methylthiolation of N6-(dimethylallyl)adenosine (i(6)A), leading to the formation of 2-methylthio-N6- (dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine. | 0.763 |
CUM68981.1 | mutL | ERS852414_00071 | ERS852414_00069 | Methionine gamma-lyase. | DNA mismatch repair protein mutL; This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a 'molecular matchmaker', a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex. | 0.785 |
CUM68981.1 | mutS_1 | ERS852414_00071 | ERS852414_00068 | Methionine gamma-lyase. | DNA mismatch repair protein mutS; This protein is involved in the repair of mismatches in DNA. It is possible that it carries out the mismatch recognition step. This protein has a weak ATPase activity. | 0.763 |
CUM68988.1 | CUM68981.1 | ERS852414_00072 | ERS852414_00071 | N-methyltryptophan oxidase. | Methionine gamma-lyase. | 0.826 |
CUM68988.1 | CUM68993.1 | ERS852414_00072 | ERS852414_00073 | N-methyltryptophan oxidase. | Uncharacterized conserved protein. | 0.884 |
CUM68988.1 | miaA | ERS852414_00072 | ERS852414_00070 | N-methyltryptophan oxidase. | tRNA dimethylallyltransferase; Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A); Belongs to the IPP transferase family. | 0.787 |
CUM68988.1 | miaB_1 | ERS852414_00072 | ERS852414_00067 | N-methyltryptophan oxidase. | (Dimethylallyl)adenosine tRNA methylthiotransferase MiaB; Catalyzes the methylthiolation of N6-(dimethylallyl)adenosine (i(6)A), leading to the formation of 2-methylthio-N6- (dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine. | 0.747 |
CUM68988.1 | mutL | ERS852414_00072 | ERS852414_00069 | N-methyltryptophan oxidase. | DNA mismatch repair protein mutL; This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a 'molecular matchmaker', a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex. | 0.768 |
CUM68988.1 | mutS_1 | ERS852414_00072 | ERS852414_00068 | N-methyltryptophan oxidase. | DNA mismatch repair protein mutS; This protein is involved in the repair of mismatches in DNA. It is possible that it carries out the mismatch recognition step. This protein has a weak ATPase activity. | 0.748 |
CUM68993.1 | CUM68981.1 | ERS852414_00073 | ERS852414_00071 | Uncharacterized conserved protein. | Methionine gamma-lyase. | 0.826 |
CUM68993.1 | CUM68988.1 | ERS852414_00073 | ERS852414_00072 | Uncharacterized conserved protein. | N-methyltryptophan oxidase. | 0.884 |
CUM68993.1 | miaA | ERS852414_00073 | ERS852414_00070 | Uncharacterized conserved protein. | tRNA dimethylallyltransferase; Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A); Belongs to the IPP transferase family. | 0.787 |
CUM68993.1 | miaB_1 | ERS852414_00073 | ERS852414_00067 | Uncharacterized conserved protein. | (Dimethylallyl)adenosine tRNA methylthiotransferase MiaB; Catalyzes the methylthiolation of N6-(dimethylallyl)adenosine (i(6)A), leading to the formation of 2-methylthio-N6- (dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine. | 0.747 |
CUM68993.1 | mutL | ERS852414_00073 | ERS852414_00069 | Uncharacterized conserved protein. | DNA mismatch repair protein mutL; This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a 'molecular matchmaker', a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex. | 0.768 |
CUM68993.1 | mutS_1 | ERS852414_00073 | ERS852414_00068 | Uncharacterized conserved protein. | DNA mismatch repair protein mutS; This protein is involved in the repair of mismatches in DNA. It is possible that it carries out the mismatch recognition step. This protein has a weak ATPase activity. | 0.748 |
hflX | CUM68981.1 | ERS852414_03283 | ERS852414_00071 | GTP-binding protein HflX; GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. HflX GTPase family. | Methionine gamma-lyase. | 0.487 |
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