STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CUM69094.1Uncharacterised protein. (139 aa)    
Predicted Functional Partners:
dnaN
DNA polymerase III subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...]
 
 
 0.963
CUM90438.1
Uncharacterised protein.
   
 
 0.821
dnaC_3
Replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity. Belongs to the helicase family. DnaB subfamily.
   
 
 0.821
gmhA
Phosphoheptose isomerase.
    
 
 0.800
dnaC_2
DNA replication protein dnaC; Belongs to the DnaA family.
  
 
 
 0.758
mrdB
Rod shape-determining protein RodA; Belongs to the SEDS family.
     
 0.682
cdr
Coenzyme A disulfide reductase.
  
    0.678
CUM69119.1
Putative membrane fusion protein.
 
     0.656
soj
Sporulation initiation inhibitor protein soj.
  
 
 0.619
CUN09946.1
Uncharacterised protein.
  
 
 0.619
Your Current Organism:
Blautia hydrogenotrophica
NCBI taxonomy Id: 53443
Other names: B. hydrogenotrophica, DSM 10507, JCM 14656, Ruminococcus hydrogenotrophicus, strain S5a33
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.