STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ilvE_2Branched-chain-amino-acid aminotransferase. (341 aa)    
Predicted Functional Partners:
ilvD_1
Dihydroxy-acid dehydratase; Belongs to the IlvD/Edd family.
  
 0.972
ilvD_2
Dihydroxy-acid dehydratase; Belongs to the IlvD/Edd family.
  
 0.946
leuA
2-isopropylmalate synthase; Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3- hydroxy-4-methylpentanoate (2-isopropylmalate); Belongs to the alpha-IPM synthase/homocitrate synthase family. LeuA type 2 subfamily.
  
 0.932
CUM86262.1
4-hyroxy-2-oxovalerate/4-hydroxy-2-oxopentanoic acid aldolase%2C.
  
 0.923
porA_2
Pyruvate synthase subunit porA.
  
 
 0.913
sulD
Bifunctional folate synthesis protein; Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin.
  
 
 0.891
tdcB
L-threonine dehydratase catabolic TdcB.
  
 
 0.881
pheA
P-protein.
    
 0.868
hom_1
Homoserine dehydrogenase.
  
 
 0.830
hom_2
Homoserine dehydrogenase.
  
 
 0.830
Your Current Organism:
Blautia hydrogenotrophica
NCBI taxonomy Id: 53443
Other names: B. hydrogenotrophica, DSM 10507, JCM 14656, Ruminococcus hydrogenotrophicus, strain S5a33
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