STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CUN13332.1Uncharacterised protein. (79 aa)    
Predicted Functional Partners:
CUN13343.1
T5orf172 domain.
       0.623
CUN13319.1
Helix-turn-helix domain.
       0.509
CUN13355.1
Uncharacterised protein.
       0.502
CUN13299.1
YgiT-type zinc finger domain.
       0.500
CUN13309.1
Uncharacterised protein.
       0.500
CUN13289.1
Domain of uncharacterised function (DUF955).
       0.430
CUN13368.1
DNA binding domain%2C excisionase family.
       0.400
CUN13379.1
Uncharacterised protein.
       0.400
Your Current Organism:
Blautia hydrogenotrophica
NCBI taxonomy Id: 53443
Other names: B. hydrogenotrophica, DSM 10507, JCM 14656, Ruminococcus hydrogenotrophicus, strain S5a33
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.