STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pta_6Phosphate acetyltransferase. (302 aa)    
Predicted Functional Partners:
buk2_6
Butyrate kinase 2; Belongs to the acetokinase family.
 
 0.962
ackA
Acetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family.
 
 0.952
porA_2
Pyruvate synthase subunit porA.
   
 0.902
porB_7
Pyruvate synthase subunit porB.
   
 0.864
porA_7
Pyruvate synthase subunit porA.
    
 0.857
buk2_3
Butyrate kinase 2; Belongs to the acetokinase family.
 
 0.820
buk2_7
Butyrate kinase 2; Belongs to the acetokinase family.
 
 0.812
buk2_4
Probable butyrate kinase 2; Belongs to the acetokinase family.
 
 0.803
CUN15512.1
Uncharacterized Fe-S center protein.
    
 0.802
buk2_1
Butyrate kinase 2; Belongs to the acetokinase family.
 
 0.801
Your Current Organism:
Blautia hydrogenotrophica
NCBI taxonomy Id: 53443
Other names: B. hydrogenotrophica, DSM 10507, JCM 14656, Ruminococcus hydrogenotrophicus, strain S5a33
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