STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CUN20123.1Relaxase/Mobilisation nuclease domain. (369 aa)    
Predicted Functional Partners:
CUN20131.1
Bacterial mobilisation protein (MobC).
 
    0.950
addA
ATP-dependent helicase/nuclease subunit A; ATP-dependent DNA helicase.
  
 
 0.873
dnaN
DNA polymerase III subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...]
  
 
 0.859
recQ
ATP-dependent DNA helicase recQ.
  
 
 0.823
CUN20140.1
Uncharacterised protein.
       0.773
yjcD
Putative ATP-dependent DNA helicase yjcD.
  
 
 0.736
pcrA
ATP-dependent DNA helicase pcrA.
  
 
 0.736
sbcC
Nuclease sbcCD subunit C.
 
 
 
 0.716
CUM97083.1
Mannosyltransferase OCH1 and related enzymes.
  
     0.694
CUN18497.1
Tetratricopeptide repeat protein.
  
 
 0.652
Your Current Organism:
Blautia hydrogenotrophica
NCBI taxonomy Id: 53443
Other names: B. hydrogenotrophica, DSM 10507, JCM 14656, Ruminococcus hydrogenotrophicus, strain S5a33
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