Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ANZ58907.1MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (452 aa)    
Predicted Functional Partners:
ANZ58908.1
Maltose phosphorylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.793
ANZ58909.1
Galactose mutarotase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.720
ANZ58910.1
Beta-phosphoglucomutase; Catalyzes the interconversion of beta-D-glucose 6-phosphate to beta-D-glucose 1-phosphate; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.698
ANZ58906.1
Transposase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.490
Your Current Organism:
Lactobacillus lindneri
NCBI taxonomy Id: 53444
Other names: CIP 102983, DSM 20690, JCM 11027, L. lindneri, LMG 14528, LMG:14528, strain KPA
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