STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ANZ58955.1Addiction module toxin RelE; Derived by automated computational analysis using gene prediction method: Protein Homology. (91 aa)    
Predicted Functional Partners:
ANZ58998.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
 
 0.799
ANZ59739.1
Prevent-host-death protein; Antitoxin component of a type II toxin-antitoxin (TA) system.
   
 
 0.710
ANZ58954.1
Antitoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.670
ANZ58956.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.568
ANZ58953.1
Copper oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.403
Your Current Organism:
Lactobacillus lindneri
NCBI taxonomy Id: 53444
Other names: CIP 102983, DSM 20690, JCM 11027, L. lindneri, LMG 14528, LMG:14528, strain KPA
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.