STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
actP_2Cu+-exporting ATPase. (820 aa)    
Predicted Functional Partners:
hmrR
Cu(I)-responsive transcriptional regulator.
 
  
 0.918
SEP71764.1
Copper chaperone.
 
 
 0.914
pacS
Cu2+-exporting ATPase.
 
 
0.784
silP
Heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase.
 
 
0.770
arsC_3
Transcriptional regulator, ArsR family; Belongs to the low molecular weight phosphotyrosine protein phosphatase family.
  
  
 0.726
dps1
Starvation-inducible DNA-binding protein; Belongs to the Dps family.
  
  
 0.679
czcD
Cobalt-zinc-cadmium efflux system protein.
  
  
 0.650
cysJ_2
Sulfite reductase (NADPH) flavoprotein alpha-component.
  
  
 0.602
luxQ_1
Signal transduction histidine kinase.
  
  
 0.597
grxC
Glutaredoxin 3; Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins.
   
 
 0.582
Your Current Organism:
Thalassobius gelatinovorus
NCBI taxonomy Id: 53501
Other names: ATCC 25655, Agrobacterium gelatinovorum, CECT 4357, CIP 105976, DSM 5887, IAM 12617, JCM 20688, LMG 129, LMG:129, NBRC 15761, Ruegeria gelatinovora, Ruegeria gelatinovorans, T. gelatinovorus
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