Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SEP79394.1 | SEP89248.1 | SAMN04488043_101413 | SAMN04488043_10288 | Hypothetical protein. | Cysteine-rich secretory protein family protein. | 0.747 |
SEP79394.1 | SEQ08607.1 | SAMN04488043_101413 | SAMN04488043_103151 | Hypothetical protein. | Hypothetical protein. | 0.744 |
SEP79394.1 | SEQ84130.1 | SAMN04488043_101413 | SAMN04488043_109140 | Hypothetical protein. | Hypothetical protein. | 0.686 |
SEP79394.1 | erfK_1 | SAMN04488043_101413 | SAMN04488043_10289 | Hypothetical protein. | L,D-transpeptidase catalytic domain. | 0.558 |
SEP89227.1 | SEQ10643.1 | SAMN04488043_10287 | SAMN04488043_103219 | L,D-transpeptidase catalytic domain. | Murein L,D-transpeptidase YcbB/YkuD. | 0.538 |
SEP89227.1 | erfK_1 | SAMN04488043_10287 | SAMN04488043_10289 | L,D-transpeptidase catalytic domain. | L,D-transpeptidase catalytic domain. | 0.698 |
SEP89248.1 | SEP79394.1 | SAMN04488043_10288 | SAMN04488043_101413 | Cysteine-rich secretory protein family protein. | Hypothetical protein. | 0.747 |
SEP89248.1 | SEQ08607.1 | SAMN04488043_10288 | SAMN04488043_103151 | Cysteine-rich secretory protein family protein. | Hypothetical protein. | 0.710 |
SEP89248.1 | SEQ84130.1 | SAMN04488043_10288 | SAMN04488043_109140 | Cysteine-rich secretory protein family protein. | Hypothetical protein. | 0.741 |
SEP89248.1 | erfK_1 | SAMN04488043_10288 | SAMN04488043_10289 | Cysteine-rich secretory protein family protein. | L,D-transpeptidase catalytic domain. | 0.714 |
SEP89305.1 | erfK_1 | SAMN04488043_10290 | SAMN04488043_10289 | Hypothetical protein. | L,D-transpeptidase catalytic domain. | 0.512 |
SEQ08607.1 | SEP79394.1 | SAMN04488043_103151 | SAMN04488043_101413 | Hypothetical protein. | Hypothetical protein. | 0.744 |
SEQ08607.1 | SEP89248.1 | SAMN04488043_103151 | SAMN04488043_10288 | Hypothetical protein. | Cysteine-rich secretory protein family protein. | 0.710 |
SEQ08607.1 | SEQ84130.1 | SAMN04488043_103151 | SAMN04488043_109140 | Hypothetical protein. | Hypothetical protein. | 0.747 |
SEQ08607.1 | erfK_1 | SAMN04488043_103151 | SAMN04488043_10289 | Hypothetical protein. | L,D-transpeptidase catalytic domain. | 0.457 |
SEQ10643.1 | SEP89227.1 | SAMN04488043_103219 | SAMN04488043_10287 | Murein L,D-transpeptidase YcbB/YkuD. | L,D-transpeptidase catalytic domain. | 0.538 |
SEQ10643.1 | erfK_1 | SAMN04488043_103219 | SAMN04488043_10289 | Murein L,D-transpeptidase YcbB/YkuD. | L,D-transpeptidase catalytic domain. | 0.456 |
SEQ10643.1 | mepA_2 | SAMN04488043_103219 | SAMN04488043_102273 | Murein L,D-transpeptidase YcbB/YkuD. | Penicillin-insensitive murein endopeptidase. | 0.425 |
SEQ84130.1 | SEP79394.1 | SAMN04488043_109140 | SAMN04488043_101413 | Hypothetical protein. | Hypothetical protein. | 0.686 |
SEQ84130.1 | SEP89248.1 | SAMN04488043_109140 | SAMN04488043_10288 | Hypothetical protein. | Cysteine-rich secretory protein family protein. | 0.741 |
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