Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SEQ05084.1 | SEQ05108.1 | SAMN04488043_10329 | SAMN04488043_10330 | Histidine phosphotransferase ChpT. | Protein of unknown function. | 0.731 |
SEQ05084.1 | SEQ05145.1 | SAMN04488043_10329 | SAMN04488043_10331 | Histidine phosphotransferase ChpT. | Ornithine-acyl[acyl carrier protein] N-acyltransferase. | 0.621 |
SEQ05084.1 | SEQ05176.1 | SAMN04488043_10329 | SAMN04488043_10332 | Histidine phosphotransferase ChpT. | Lyso-ornithine lipid acyltransferase. | 0.621 |
SEQ05108.1 | SEQ05084.1 | SAMN04488043_10330 | SAMN04488043_10329 | Protein of unknown function. | Histidine phosphotransferase ChpT. | 0.731 |
SEQ05108.1 | SEQ05145.1 | SAMN04488043_10330 | SAMN04488043_10331 | Protein of unknown function. | Ornithine-acyl[acyl carrier protein] N-acyltransferase. | 0.741 |
SEQ05108.1 | SEQ05176.1 | SAMN04488043_10330 | SAMN04488043_10332 | Protein of unknown function. | Lyso-ornithine lipid acyltransferase. | 0.696 |
SEQ05108.1 | SEQ63943.1 | SAMN04488043_10330 | SAMN04488043_10757 | Protein of unknown function. | Uncharacterized conserved protein, contains Zn-finger domain. | 0.593 |
SEQ05108.1 | thyX | SAMN04488043_10330 | SAMN04488043_101124 | Protein of unknown function. | Thymidylate synthase (FAD); Catalyzes the reductive methylation of 2'-deoxyuridine-5'- monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor, and NADPH and FADH(2) as the reductant. | 0.483 |
SEQ05145.1 | SEQ05084.1 | SAMN04488043_10331 | SAMN04488043_10329 | Ornithine-acyl[acyl carrier protein] N-acyltransferase. | Histidine phosphotransferase ChpT. | 0.621 |
SEQ05145.1 | SEQ05108.1 | SAMN04488043_10331 | SAMN04488043_10330 | Ornithine-acyl[acyl carrier protein] N-acyltransferase. | Protein of unknown function. | 0.741 |
SEQ05145.1 | SEQ05176.1 | SAMN04488043_10331 | SAMN04488043_10332 | Ornithine-acyl[acyl carrier protein] N-acyltransferase. | Lyso-ornithine lipid acyltransferase. | 0.983 |
SEQ05176.1 | SEQ05084.1 | SAMN04488043_10332 | SAMN04488043_10329 | Lyso-ornithine lipid acyltransferase. | Histidine phosphotransferase ChpT. | 0.621 |
SEQ05176.1 | SEQ05108.1 | SAMN04488043_10332 | SAMN04488043_10330 | Lyso-ornithine lipid acyltransferase. | Protein of unknown function. | 0.696 |
SEQ05176.1 | SEQ05145.1 | SAMN04488043_10332 | SAMN04488043_10331 | Lyso-ornithine lipid acyltransferase. | Ornithine-acyl[acyl carrier protein] N-acyltransferase. | 0.983 |
SEQ63943.1 | SEQ05108.1 | SAMN04488043_10757 | SAMN04488043_10330 | Uncharacterized conserved protein, contains Zn-finger domain. | Protein of unknown function. | 0.593 |
thyX | SEQ05108.1 | SAMN04488043_101124 | SAMN04488043_10330 | Thymidylate synthase (FAD); Catalyzes the reductive methylation of 2'-deoxyuridine-5'- monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor, and NADPH and FADH(2) as the reductant. | Protein of unknown function. | 0.483 |