STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
acsA_6acetyl-CoA synthetase. (525 aa)    
Predicted Functional Partners:
gltA_1
Citrate synthase; Belongs to the citrate synthase family.
  
 0.949
glcB
Malate synthase; Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl- CoA) and glyoxylate to form malate and CoA; Belongs to the malate synthase family. GlcB subfamily.
   
 0.942
mmsA
Methylmalonate-semialdehyde dehydrogenase [acylating].
   
 0.928
gabD_3
Aldehyde dehydrogenase (NAD+); Belongs to the aldehyde dehydrogenase family.
   
 0.926
ald_1
Aldehyde dehydrogenase (NAD+).
   
 0.926
aldA
Aldehyde dehydrogenase (NAD+); Belongs to the aldehyde dehydrogenase family.
   
 0.926
betB_2
Aldehyde dehydrogenase (NAD+); Belongs to the aldehyde dehydrogenase family.
   
 0.926
accC_1
acetyl-CoA carboxylase, biotin carboxylase subunit; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA.
 
 0.919
ackA
Acetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family.
   
 
 0.919
acsA_7
acetyl-CoA synthetase.
  
  
 
0.917
Your Current Organism:
Thalassobius gelatinovorus
NCBI taxonomy Id: 53501
Other names: ATCC 25655, Agrobacterium gelatinovorum, CECT 4357, CIP 105976, DSM 5887, IAM 12617, JCM 20688, LMG 129, LMG:129, NBRC 15761, Ruegeria gelatinovora, Ruegeria gelatinovorans, T. gelatinovorus
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