STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEQ40564.1Hypothetical protein. (272 aa)    
Predicted Functional Partners:
SEQ40530.1
Hypothetical protein.
 
     0.895
SER17785.1
Hypothetical protein.
 
     0.761
SEQ51822.1
Glycosyl transferase family 2.
  
     0.748
SEQ51851.1
Hypothetical protein.
  
     0.732
SEQ51873.1
Glycosyl transferase family 2.
  
     0.674
SEP69704.1
Hypothetical protein.
  
     0.624
SEQ51169.1
Glycosyl transferase family 2.
  
     0.606
SEQ93989.1
Hypothetical protein.
  
     0.583
SEQ51196.1
Glycosyl transferase family 2.
  
     0.563
SEP69902.1
Protein of unknown function.
  
     0.480
Your Current Organism:
Thalassobius gelatinovorus
NCBI taxonomy Id: 53501
Other names: ATCC 25655, Agrobacterium gelatinovorum, CECT 4357, CIP 105976, DSM 5887, IAM 12617, JCM 20688, LMG 129, LMG:129, NBRC 15761, Ruegeria gelatinovora, Ruegeria gelatinovorans, T. gelatinovorus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.