Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SEQ80704.1 | arsC_2 | SAMN04488043_10928 | SAMN04488043_10930 | Uncharacterized conserved protein, DUF952 family. | Arsenate reductase. | 0.883 |
SEQ80704.1 | pyrD | SAMN04488043_10928 | SAMN04488043_10929 | Uncharacterized conserved protein, DUF952 family. | Dihydroorotate oxidase A; Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor; Belongs to the dihydroorotate dehydrogenase family. Type 2 subfamily. | 0.859 |
arsC_2 | SEQ80704.1 | SAMN04488043_10930 | SAMN04488043_10928 | Arsenate reductase. | Uncharacterized conserved protein, DUF952 family. | 0.883 |
arsC_2 | pyrD | SAMN04488043_10930 | SAMN04488043_10929 | Arsenate reductase. | Dihydroorotate oxidase A; Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor; Belongs to the dihydroorotate dehydrogenase family. Type 2 subfamily. | 0.875 |
carA | carB | SAMN04488043_1176 | SAMN04488043_104164 | Carbamoyl-phosphate synthase small subunit; Belongs to the CarA family. | Carbamoyl-phosphate synthase large subunit; Belongs to the CarB family. | 0.999 |
carA | pheT | SAMN04488043_1176 | SAMN04488043_10818 | Carbamoyl-phosphate synthase small subunit; Belongs to the CarA family. | phenylalanyl-tRNA synthetase beta subunit; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily. | 0.496 |
carA | pyrB | SAMN04488043_1176 | SAMN04488043_101401 | Carbamoyl-phosphate synthase small subunit; Belongs to the CarA family. | Aspartate carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family. | 0.999 |
carA | pyrC_1 | SAMN04488043_1176 | SAMN04488043_101404 | Carbamoyl-phosphate synthase small subunit; Belongs to the CarA family. | Dihydroorotase. | 0.989 |
carA | pyrC_2 | SAMN04488043_1176 | SAMN04488043_10627 | Carbamoyl-phosphate synthase small subunit; Belongs to the CarA family. | Dihydroorotase; Catalyzes the reversible cyclization of carbamoyl aspartate to dihydroorotate. | 0.581 |
carA | pyrD | SAMN04488043_1176 | SAMN04488043_10929 | Carbamoyl-phosphate synthase small subunit; Belongs to the CarA family. | Dihydroorotate oxidase A; Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor; Belongs to the dihydroorotate dehydrogenase family. Type 2 subfamily. | 0.909 |
carA | pyrE | SAMN04488043_1176 | SAMN04488043_10626 | Carbamoyl-phosphate synthase small subunit; Belongs to the CarA family. | Orotate phosphoribosyltransferase; Catalyzes the transfer of a ribosyl phosphate group from 5- phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP). | 0.937 |
carA | pyrF | SAMN04488043_1176 | SAMN04488043_1217 | Carbamoyl-phosphate synthase small subunit; Belongs to the CarA family. | Orotidine-5'-phosphate decarboxylase; Catalyzes the decarboxylation of orotidine 5'-monophosphate (OMP) to uridine 5'-monophosphate (UMP); Belongs to the OMP decarboxylase family. Type 1 subfamily. | 0.927 |
carB | carA | SAMN04488043_104164 | SAMN04488043_1176 | Carbamoyl-phosphate synthase large subunit; Belongs to the CarB family. | Carbamoyl-phosphate synthase small subunit; Belongs to the CarA family. | 0.999 |
carB | pheT | SAMN04488043_104164 | SAMN04488043_10818 | Carbamoyl-phosphate synthase large subunit; Belongs to the CarB family. | phenylalanyl-tRNA synthetase beta subunit; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily. | 0.488 |
carB | pyrB | SAMN04488043_104164 | SAMN04488043_101401 | Carbamoyl-phosphate synthase large subunit; Belongs to the CarB family. | Aspartate carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family. | 0.999 |
carB | pyrC_1 | SAMN04488043_104164 | SAMN04488043_101404 | Carbamoyl-phosphate synthase large subunit; Belongs to the CarB family. | Dihydroorotase. | 0.989 |
carB | pyrC_2 | SAMN04488043_104164 | SAMN04488043_10627 | Carbamoyl-phosphate synthase large subunit; Belongs to the CarB family. | Dihydroorotase; Catalyzes the reversible cyclization of carbamoyl aspartate to dihydroorotate. | 0.726 |
carB | pyrD | SAMN04488043_104164 | SAMN04488043_10929 | Carbamoyl-phosphate synthase large subunit; Belongs to the CarB family. | Dihydroorotate oxidase A; Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor; Belongs to the dihydroorotate dehydrogenase family. Type 2 subfamily. | 0.920 |
carB | pyrE | SAMN04488043_104164 | SAMN04488043_10626 | Carbamoyl-phosphate synthase large subunit; Belongs to the CarB family. | Orotate phosphoribosyltransferase; Catalyzes the transfer of a ribosyl phosphate group from 5- phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP). | 0.953 |
carB | pyrF | SAMN04488043_104164 | SAMN04488043_1217 | Carbamoyl-phosphate synthase large subunit; Belongs to the CarB family. | Orotidine-5'-phosphate decarboxylase; Catalyzes the decarboxylation of orotidine 5'-monophosphate (OMP) to uridine 5'-monophosphate (UMP); Belongs to the OMP decarboxylase family. Type 1 subfamily. | 0.949 |
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