STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pht3_1Phenylpropionate dioxygenase, large terminal subunit. (409 aa)    
Predicted Functional Partners:
pht3_2
Rieske [2Fe-2S] domain-containing protein.
 
     0.942
glnA_2
Glutamine synthetase.
 
     0.714
SER00713.1
Hypothetical protein.
       0.688
boxB
benzoyl-CoA oxygenase, component B.
  
     0.631
boxC
2,3-dihydro-2,3-dihydroxybenzoyl-CoA ring cleavage enzyme.
  
     0.599
aroK_2
Transcriptional regulator, XRE family with shikimate kinase activity; Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate; Belongs to the shikimate kinase family.
  
     0.576
SEQ81990.1
Hypothetical protein.
  
     0.483
cysJ_1
MioC protein.
 
     0.462
hbaA_1
benzoate-CoA ligase.
  
     0.445
SEQ82025.1
Pimeloyl-ACP methyl ester carboxylesterase.
  
     0.439
Your Current Organism:
Thalassobius gelatinovorus
NCBI taxonomy Id: 53501
Other names: ATCC 25655, Agrobacterium gelatinovorum, CECT 4357, CIP 105976, DSM 5887, IAM 12617, JCM 20688, LMG 129, LMG:129, NBRC 15761, Ruegeria gelatinovora, Ruegeria gelatinovorans, T. gelatinovorus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.