STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LENED_000328Uncharacterized protein. (568 aa)    
Predicted Functional Partners:
LENED_008831
Fungal peroxidase.
    
 0.914
LENED_008960
Rho gtpase activator.
   
 0.806
LENED_002967
Lim domain containing protein.
   
 0.789
LENED_006901
Enolase C-terminal domain-like protein.
   
 0.789
LENED_005547
Signal transducer.
    
 0.709
LENED_000909
Cyclin-dependent protein kinase inhibitor.
    
 0.608
LENED_009436
Glycosyltransferase family 2 protein.
    
  0.600
LENED_007143
Ubiquitin conjugating enzyme family protein.
    
 0.595
LENED_002837
PCI-domain-containing protein.
    
  0.557
LENED_002613
Uba ts-n domain protein.
    
  0.554
Your Current Organism:
Lentinula edodes
NCBI taxonomy Id: 5353
Other names: L. edodes, Lentinus edodes, shiitake mushroom
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.