STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LENED_000576Iron-sulfur cluster assembly protein; Scaffold protein for the de novo synthesis of iron-sulfur (Fe-S) clusters within mitochondria, which is required for maturation of both mitochondrial and cytoplasmic [2Fe-2S] and [4Fe-4S] proteins. (188 aa)    
Predicted Functional Partners:
LENED_001737
Cysteine desulfurase NFS1.
 
 0.998
LENED_001803
PLP-dependent transferase.
  
 0.998
LENED_005380
Co-chaperone Hsc20.
  
 
 0.994
LENED_001912
Complex 1 protein (Lyr family) protein; Belongs to the complex I LYR family.
    
 0.987
LENED_000118
PLP-dependent transferase.
  
 0.981
LENED_000500
PLP-dependent transferase.
  
 0.981
LENED_001382
PLP-dependent transferase.
  
 0.981
LENED_007753
PLP-dependent transferase.
  
 0.981
LENED_008447
PLP-dependent transferase.
  
 0.981
LENED_012190
Ferredoxin.
 
 0.968
Your Current Organism:
Lentinula edodes
NCBI taxonomy Id: 5353
Other names: L. edodes, Lentinus edodes, shiitake mushroom
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