Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
LENED_000118 | LENED_000576 | A0A1Q3DUV4 | A0A1Q3DVW1 | PLP-dependent transferase. | Iron-sulfur cluster assembly protein; Scaffold protein for the de novo synthesis of iron-sulfur (Fe-S) clusters within mitochondria, which is required for maturation of both mitochondrial and cytoplasmic [2Fe-2S] and [4Fe-4S] proteins. | 0.981 |
LENED_000118 | LENED_001382 | A0A1Q3DUV4 | A0A1Q3DXZ3 | PLP-dependent transferase. | PLP-dependent transferase. | 0.789 |
LENED_000118 | LENED_001803 | A0A1Q3DUV4 | A0A1Q3DZH1 | PLP-dependent transferase. | PLP-dependent transferase. | 0.697 |
LENED_000118 | LENED_001912 | A0A1Q3DUV4 | A0A1Q3DZR1 | PLP-dependent transferase. | Complex 1 protein (Lyr family) protein; Belongs to the complex I LYR family. | 0.926 |
LENED_000118 | LENED_005380 | A0A1Q3DUV4 | A0A1Q3E8Z0 | PLP-dependent transferase. | Co-chaperone Hsc20. | 0.696 |
LENED_000118 | LENED_007753 | A0A1Q3DUV4 | A0A1Q3EF77 | PLP-dependent transferase. | PLP-dependent transferase. | 0.792 |
LENED_000118 | LENED_012190 | A0A1Q3DUV4 | A0A1Q3ERY7 | PLP-dependent transferase. | Ferredoxin. | 0.877 |
LENED_000500 | LENED_000576 | A0A1Q3DVV3 | A0A1Q3DVW1 | PLP-dependent transferase. | Iron-sulfur cluster assembly protein; Scaffold protein for the de novo synthesis of iron-sulfur (Fe-S) clusters within mitochondria, which is required for maturation of both mitochondrial and cytoplasmic [2Fe-2S] and [4Fe-4S] proteins. | 0.981 |
LENED_000500 | LENED_001803 | A0A1Q3DVV3 | A0A1Q3DZH1 | PLP-dependent transferase. | PLP-dependent transferase. | 0.697 |
LENED_000500 | LENED_001912 | A0A1Q3DVV3 | A0A1Q3DZR1 | PLP-dependent transferase. | Complex 1 protein (Lyr family) protein; Belongs to the complex I LYR family. | 0.926 |
LENED_000500 | LENED_005380 | A0A1Q3DVV3 | A0A1Q3E8Z0 | PLP-dependent transferase. | Co-chaperone Hsc20. | 0.696 |
LENED_000500 | LENED_012190 | A0A1Q3DVV3 | A0A1Q3ERY7 | PLP-dependent transferase. | Ferredoxin. | 0.877 |
LENED_000576 | LENED_000118 | A0A1Q3DVW1 | A0A1Q3DUV4 | Iron-sulfur cluster assembly protein; Scaffold protein for the de novo synthesis of iron-sulfur (Fe-S) clusters within mitochondria, which is required for maturation of both mitochondrial and cytoplasmic [2Fe-2S] and [4Fe-4S] proteins. | PLP-dependent transferase. | 0.981 |
LENED_000576 | LENED_000500 | A0A1Q3DVW1 | A0A1Q3DVV3 | Iron-sulfur cluster assembly protein; Scaffold protein for the de novo synthesis of iron-sulfur (Fe-S) clusters within mitochondria, which is required for maturation of both mitochondrial and cytoplasmic [2Fe-2S] and [4Fe-4S] proteins. | PLP-dependent transferase. | 0.981 |
LENED_000576 | LENED_001382 | A0A1Q3DVW1 | A0A1Q3DXZ3 | Iron-sulfur cluster assembly protein; Scaffold protein for the de novo synthesis of iron-sulfur (Fe-S) clusters within mitochondria, which is required for maturation of both mitochondrial and cytoplasmic [2Fe-2S] and [4Fe-4S] proteins. | PLP-dependent transferase. | 0.981 |
LENED_000576 | LENED_001737 | A0A1Q3DVW1 | A0A1Q3DZ22 | Iron-sulfur cluster assembly protein; Scaffold protein for the de novo synthesis of iron-sulfur (Fe-S) clusters within mitochondria, which is required for maturation of both mitochondrial and cytoplasmic [2Fe-2S] and [4Fe-4S] proteins. | Cysteine desulfurase NFS1. | 0.998 |
LENED_000576 | LENED_001803 | A0A1Q3DVW1 | A0A1Q3DZH1 | Iron-sulfur cluster assembly protein; Scaffold protein for the de novo synthesis of iron-sulfur (Fe-S) clusters within mitochondria, which is required for maturation of both mitochondrial and cytoplasmic [2Fe-2S] and [4Fe-4S] proteins. | PLP-dependent transferase. | 0.998 |
LENED_000576 | LENED_001912 | A0A1Q3DVW1 | A0A1Q3DZR1 | Iron-sulfur cluster assembly protein; Scaffold protein for the de novo synthesis of iron-sulfur (Fe-S) clusters within mitochondria, which is required for maturation of both mitochondrial and cytoplasmic [2Fe-2S] and [4Fe-4S] proteins. | Complex 1 protein (Lyr family) protein; Belongs to the complex I LYR family. | 0.987 |
LENED_000576 | LENED_005380 | A0A1Q3DVW1 | A0A1Q3E8Z0 | Iron-sulfur cluster assembly protein; Scaffold protein for the de novo synthesis of iron-sulfur (Fe-S) clusters within mitochondria, which is required for maturation of both mitochondrial and cytoplasmic [2Fe-2S] and [4Fe-4S] proteins. | Co-chaperone Hsc20. | 0.994 |
LENED_000576 | LENED_007753 | A0A1Q3DVW1 | A0A1Q3EF77 | Iron-sulfur cluster assembly protein; Scaffold protein for the de novo synthesis of iron-sulfur (Fe-S) clusters within mitochondria, which is required for maturation of both mitochondrial and cytoplasmic [2Fe-2S] and [4Fe-4S] proteins. | PLP-dependent transferase. | 0.981 |
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